Originally Posted by
r3nov8or
There is lots we don't know...
The stirrups could have been what was on hand, or gotten cheap, or were the aesthetic the owner wanted.
If the pergola is free-standing, "high-wind" stirrups (what I call them) may have been chosen for lateral stability.
If the pergola didn't originally have a roof (that's what a pergola is, unroofed :) ) then uplift forces would not have been a concern and coach screws would be fine.
Installing a roof, sure, now is the time to use through-bolts.
Re getting the holes right, you just drill part/half way as accurately as possible from both sides and the drill bit will be drawn to the exit hole without problem. Done many times...